Martin Krzywinski / Canada's Michael Smith Genome Sciences Centre / mkweb.bcgsc.ca Martin Krzywinski / Canada's Michael Smith Genome Sciences Centre / mkweb.bcgsc.ca - contact me Martin Krzywinski / Canada's Michael Smith Genome Sciences Centre / mkweb.bcgsc.ca on Twitter Martin Krzywinski / Canada's Michael Smith Genome Sciences Centre / mkweb.bcgsc.ca - Lumondo Photography Martin Krzywinski / Canada's Michael Smith Genome Sciences Centre / mkweb.bcgsc.ca - Pi Art Martin Krzywinski / Canada's Michael Smith Genome Sciences Centre / mkweb.bcgsc.ca - Hilbertonians - Creatures on the Hilbert CurveMartin Krzywinski / Canada's Michael Smith Genome Sciences Centre / mkweb.bcgsc.ca - Pi Day 2020 - Piku
And she looks like the moon. So close and yet, so far.Future Islandsaim highmore quotes


PNAS Cover: Earth BioGenome Project


Currently available Ensembl schema balls. What is Schemaball?

anopheles gambiae

core 20.2b 21.2b
estgene 20.2b 21.2b
lite 20.2b 21.2b
snp 20.2b 21.2b

caenorhabditis briggsae

core 20.25 21.25
estgene 20.25 21.25

caenorhabditis elegans

core 20.116a 21.116a

danio rerio

core 20.3b 21.3b
est 20.3b 21.3b
estgene 20.3b 21.3b
lite 20.3b 21.3b
snp 20.3b 21.3b

drosophila melanogaster

core 20.3a 21.3a

ensembl

compara 19.2 20.1 21.1
go 20.1 21.1
mart 19.3 20.1 21.1

fugu rubripes

core 20.2b 21.2c
est 21.2c
estgene 21.2c

homo sapiens

core 19.34b 20.34c 21.34d
disease 19.34b 20.34c 21.34d
est 19.34b 20.34c 21.34d
estgene 19.34b 20.34c 21.34d
haplotype 19.34b 20.34c 21.34d
lite 19.34b 20.34c 21.34d
snp 19.34b 20.34c 21.34d
vega 19.34b 20.34c 21.34d

mus musculus

core 19.30 19.32a 20.32b 21.32b
est 19.30 20.32b 21.32b
estgene 19.30 20.32b 21.32b
lite 19.30 19.32a 20.32b 21.32b
snp 19.30 19.32a 20.32b 21.32b

pan troglodytes

core 21.1

rattus norvegicus

core 20.3b 21.3b
est 20.3b 21.3b
estgene 20.3b 21.3b
lite 20.3b 21.3b
snp 20.3b 21.3b

Schema balls for genomic databases hosted by the Ensembl public server (kaka.sanger.ac.uk).

VIEW ALL

news + thoughts

Cancer Cell cover

Sat 23-04-2022

My cover design on the 11 April 2022 Cancer Cell issue depicts depicts cellular heterogeneity as a kaleidoscope generated from immunofluorescence staining of the glial and neuronal markers MBP and NeuN (respectively) in a GBM patient-derived explant.

LeBlanc VG et al. Single-cell landscapes of primary glioblastomas and matched explants and cell lines show variable retention of inter- and intratumor heterogeneity (2022) Cancer Cell 40:379–392.E9.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
My Cancer Cell kaleidoscope cover (volume 40, issue 4, 11 April 2022). (more)

Browse my gallery of cover designs.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
A catalogue of my journal and magazine cover designs. (more)

Nature Biotechnology cover

Sat 23-04-2022

My cover design on the 4 April 2022 Nature Biotechnology issue is an impression of a phylogenetic tree of over 200 million sequences.

Konno N et al. Deep distributed computing to reconstruct extremely large lineage trees (2022) Nature Biotechnology 40:566–575.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
My Nature Biotechnology phylogenetic tree cover (volume 40, issue 4, 4 April 2022). (more)

Browse my gallery of cover designs.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
A catalogue of my journal and magazine cover designs. (more)

Nature cover — Gene Genie

Sat 23-04-2022

My cover design on the 17 March 2022 Nature issue depicts the evolutionary properties of sequences at the extremes of the evolvability spectrum.

Vaishnav ED et al. The evolution, evolvability and engineering of gene regulatory DNA (2022) Nature 603:455–463.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
My Nature squiggles cover (volume 603, issue 7901, 17 March 2022). (more)

Browse my gallery of cover designs.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
A catalogue of my journal and magazine cover designs. (more)

Happy 2022 `\pi` Day—
three one four: a number of notes

Mon 14-03-2022

Celebrate `\pi` Day (March 14th) and finally hear what you've been missing.

“three one four: a number of notes” is a musical exploration of how we think about mathematics and how we feel about mathematics. It tells stories from the very beginning (314…) to the very (known) end of π (...264) as well as math (Wallis Product) and math jokes (Feynman Point), repetition (nn) and zeroes (null).

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Listen to `\pi` in the style of 20th century classical music. (details)

The album is scored for solo piano in the style of 20th century classical music – each piece has a distinct personality, drawn from styles of Boulez, Feldman, Glass, Ligeti, Monk, and Satie.

Each piece is accompanied by a piku (or πku), a poem whose syllable count is determined by a specific sequence of digits from π.

Check out art from previous years: 2013 `\pi` Day and 2014 `\pi` Day, 2015 `\pi` Day, 2016 `\pi` Day, 2017 `\pi` Day, 2018 `\pi` Day, 2019 `\pi` Day, 2020 `\pi` Day and 2021 `\pi` Day.

PNAS Cover — Earth BioGenome Project

Fri 28-01-2022

My design appears on the 25 January 2022 PNAS issue.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
My PNAS cover design captures the vision of the Earth BioGenome Project — to sequence everything. (more)

The cover shows a view of Earth that captures the vision of the Earth BioGenome Project — understanding and conserving genetic diversity on a global scale. Continents from the Authagraph projection, which preserves areas and shapes, are represented as a double helix of 32,111 bases. Short sequences of 806 unique species, sequenced as part of EBP-affiliated projects, are mapped onto the double helix of the continent (or ocean) where the species is commonly found. The length of the sequence is the same for each species on a continent (or ocean) and the sequences are separated by short gaps. Individual bases of the sequence are colored by dots. Species appear along the path in alphabetical order (by Latin name) and the first base of the first species is identified by a small black triangle.

Lewin HA et al. The Earth BioGenome Project 2020: Starting the clock. (2022) PNAS 119(4) e2115635118.

The COVID charts — hospitalization rates

Tue 25-01-2022

As part of the COVID Charts series, I fix a muddled and storyless graphic tweeted by Adrian Dix, Canada's Health Minister.

I show you how to fix color schemes to make them colorblind-accessible and effective in revealing patters, how to reduce redundancy in labels (a key but overlooked part of many visualizations) and how to extract a story out of a table to frame the narrative.

Browse all the COVID charts.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Clear titles introduce the graphic, which starts with informative and non-obvious observations of the relationship between age, number of comorbidities, vaccination status and hospitalization rates. Supporting the story is a tidy table that gives you detailed statistics for each demographic. (more)


me as a keyword list

aikido | analogies | animals | astronomy | comfortable silence | cosmology | dorothy parker | drumming | espresso | fundamental forces | good kerning | graphic design | humanism | humour | jean michel jarre | kayaking | latin | little fluffy clouds | lord of the rings | mathematics | negative space | nuance | perceptual color palettes | philosophy of science | photography | physical constants | physics | poetry | pon farr | reason | rhythm | richard feynman | science | secularism | swing | symmetry and its breaking | technology | things that make me go hmmm | typography | unix | victoria arduino | wine | words