Martin Krzywinski / Genome Sciences Center / mkweb.bcgsc.ca Martin Krzywinski / Genome Sciences Center / mkweb.bcgsc.ca - contact me Martin Krzywinski / Genome Sciences Center / mkweb.bcgsc.ca on Twitter Martin Krzywinski / Genome Sciences Center / mkweb.bcgsc.ca - Lumondo Photography Martin Krzywinski / Genome Sciences Center / mkweb.bcgsc.ca - Hilbertonians - Creatures on the Hilbert Curve
Trance opera.Spente le Stelle

ascii: fun


Visualization Tour, Melbourne, October 9–20, 2014


visualization + design

ASCII Art—Proportional Spacing, Tone/Structure Mapping and Fixed Strings

contents

  1. ASCII art
  2. proportional spaced fonts
  3. structural character selection
  4. tone-based character selection
  5. fixed string ASCII art
  6. angled text ASCII art
  7. multi-layer ASCII art
  8. recursive ASCII art

download code

asciifyimage-0.02.tgz

This is a Perl script and requires Imager. See README in the archive for instructions. I cannot provide installation support, but welcome questions and ideas about the method.

examples

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Part of the Pioneer plaque rendered with the sequence of human chromosome 1, using 8 weights of Gotham. (zoom)
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
DNA helix rendered with string 'dna'. (zoom)

After finding a typographic portrait of Christopher Hitchens, created out of Gill Sans letters by Miles Chic at Capilano University, I thought to resurrect software I wrote a long time ago that converts images into letters and expanding traditional ASCII art by using

  • proportionally spaced fonts
  • a variety of font weights in a single image
  • both tone and structure of the image to select characters
  • fixed strings to render an image in legible text

ASCII Art

The representation of images by characters—ASCII art—has a long history. ASCII art extends the emoticon (or smiley) to represent a larger piece of work. Typically, the works use a fixed-space font (e.g. Courier), originally designed for display on a terminal. Despite the sophistication of computer graphics today, ASCII art continues to have a strong following with new work continually added to public online galleries.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Community contributions to ASCII Art Museum. ASCII art can vary from simple cartoon-like depictions to photorealistic interpretations. (source, zoom)

Photos and paintings can be ASCIIfied using a tone-based approach and automated methods exist to do this (Paul D. O’Grady and Scott T. Rickard (2008) Automatic ASCII Art Conversion of Binary Images Using Non-Negative Constraints).

Many artists generate new creations, exclusive to the medium. Typically this kind of ASCII art is based on the interpretation of structure rather than tone—this method has also been automated (Xuemiao Xu, Linling Zhang, Tien-Tsin Wong (2010) Structure-based ASCII Art).

Proportional spaced and multi-font art

I have written code to generate ASCII art from images by using proportional spaced fonts.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Fixed width fonts (e.g. Pragmata) are popular. ASCII art can be extended to proportionally spaced fonts (e.g. Gotham). More than one weight (or font) can be used to add contrast.

Below is an example of how Pragmata and Gotham can be used to different effect to render an image. When a proportional spaced font is used, the ASCII shape can more fully fill the image.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Comparison of fixed and proportional spaced fonts in ASCII art. Employing multiple weights adds contrast. The grey background is added to emphasize the original image. (zoom)

Let's see how these methods work on a real image. Many ASCII art Mona Lisa versions exist. Below, I render the Mona Lisa with Pragmata, Gotham Book and 8 weights of Gotham.

structural character selection

Two-tone shapes like the S in the figure above require selecting characters that match the structure of the image. (e.g. "|" matches vertical lines). For a given character and image position there are four distinct match possibilities—a combination of whether the character and image have a signal at a position. I show this in the figure below.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Finding the best character involves maximizing overlap (s1, s3) and minimizing penalty (s2, s4).

By maximizing scores derived from matches (s1, s3) and minimizing any penalties (s2, s4), a character is identified based on maximal coverage of the image region and minimum coverage of areas that are blank.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Ink artwork, or thresholded bitmaps in which there are only two tone values, are approximated using structural matching. Here I compare the method of O'Grady and Rickard with my naive structural matching. (zoom)

When proportional text is used, edges are better approximated, such as in the Homer Simpson example below which uses Gotham Book.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
For this image, 17pt text matches the detail well. (zoom)

tone-based character selection

Images that are not two-tone require that we match both structure and tone. Structure is approximated by the choice of character, while tone by choice of font weight. To select the best character based on tone, the character's average tone is compared to the average tone of the section of the image to which it is being compared.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Heavier weights are used to match dark areas of the image. (zoom)

It is possible to combine both structure and tone metrics in character selection. Below is an example of how an image with both tone and structure is interpreted as the tone and structure score weights are varied. The balance between these two metrics can be very hard to find—it greatly depends on the image. Tone-based mapping works well when font size is small and the image is viewed from larger distance—in this case, characters play the role of individual pixels with varying brightness. Structure-based mapping works with larger type and closer viewing distance.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
A tone:structure ratio of 1:0.5 works well for the Star Trek logo. (zoom)

Continuous tone bitmaps are an idea application of multi-font ASCII art—images no longer need to be thresholded or dithered.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Applying both tone and structure character selection metrics to a greyscale image. (source, zoom, )

fixed string ASCII art

ASCII art is generated by dividing the image into a grid and finding the letter (the choice of characters is often expanded to include punctuation) that best matches the grid section. Typically, for each grid the entire set of allowable characters is sampled. Instead, we can limit the choice of character by successively sampling from a fixed string.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Fixed string ASCII art limits the choice of characters available at each grid. Characters can be drawn from a short string (e.g. 'ilovegotham') or from a larger corpus (e.g. Wikipedia entry for Mona Lisa). The string can be contiguous within the image, or locally within the font. (zoom)

rendered with the fixed string "monalisa" using 8 weights of Gotham.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Fixed string ASCII art rendering of Mona Lisa. (zoom)
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
DNA helix rendered with string 'dna'. (zoom)
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
DNA helix rendered with sequence from human chromosome 1. (zoom)

angled text ASCII art

Things get even more interesting when the text is angled.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
By applying rotations to the input and output images, the image can be approximated by angled text. (zoom)

multi-layer ASCII art

The image can be textured with multiple layers of ASCII art. In the example below, four layers of text are used, each with a different font size.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Part of the Pioneer plaque rendered with the sequence of human chromosome 1, using 4 layers of sizes (17pt, 33pt, 59pt and 93pt) and 8 weights of Gotham. (zoom)

Instead of varying size, the angle of the text can be changed among layers. This results in a pattern reminiscent of a halftone.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Part of the Pioneer plaque rendered with the sequence of human chromosome 1, using 4 layers with different text rotation (-45, -15, 15, 45 degrees) and 8 weights of Gotham. (zoom)

recursive ASCII art

An image can be asciified several times, with each iteration the asciified output of the previous step used as input for the next. At each step, the font size should be reduced to s → √s.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
ASCII, set in Gotham Ultra (zoom)
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
The above image asciified using 8 weights of 105pt Gotham and the fixed string 'ASCII'. (zoom)
Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
The asciified example above, asciified again using 8 weights of 11pt Gotham and the fixed string 'ASCII'. (zoom)

news + thoughts

Nested Designs—Assessing Sources of Noise

Mon 29-09-2014

Sources of noise in experiments can be mitigated and assessed by nested designs. This kind of experimental design naturally models replication, which was the topic of last month's column.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Nature Methods Points of Significance column: Nested designs. (read)

Nested designs are appropriate when we want to use the data derived from experimental subjects to make general statements about populations. In this case, the subjects are random factors in the experiment, in contrast to fixed factors, such as we've seen previously.

In ANOVA analysis, random factors provide information about the amount of noise contributed by each factor. This is different from inferences made about fixed factors, which typically deal with a change in mean. Using the F-test, we can determine whether each layer of replication (e.g. animal, tissue, cell) contributes additional variation to the overall measurement.

Krzywinski, M., Altman, N. & Blainey, P. (2014) Points of Significance: Nested designs Nature Methods 11:977-978.

Background reading

Blainey, P., Krzywinski, M. & Altman, N. (2014) Points of Significance: Replication Nature Methods 11:879-880.

Krzywinski, M. & Altman, N. (2014) Points of Significance: Analysis of variance (ANOVA) and blocking Nature Methods 11:699-700.

Krzywinski, M. & Altman, N. (2014) Points of Significance: Designing Comparative Experiments Nature Methods 11:597-598.

...more about the Points of Significance column

Replication—Quality over Quantity

Tue 02-09-2014

It's fitting that the column published just before Labor day weekend is all about how to best allocate labor.

Replication is used to decrease the impact of variability from parts of the experiment that contribute noise. For example, we might measure data from more than one mouse to attempt to generalize over all mice.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Nature Methods Points of Significance column: Replication. (read)

It's important to distinguish technical replicates, which attempt to capture the noise in our measuring apparatus, from biological replicates, which capture biological variation. The former give us no information about biological variation and cannot be used to directly make biological inferences. To do so is to commit pseudoreplication. Technical replicates are useful to reduce the noise so that we have a better chance to detect a biologically meaningful signal.

Blainey, P., Krzywinski, M. & Altman, N. (2014) Points of Significance: Replication Nature Methods 11:879-880.

Background reading

Krzywinski, M. & Altman, N. (2014) Points of Significance: Analysis of variance (ANOVA) and blocking Nature Methods 11:699-700.

Krzywinski, M. & Altman, N. (2014) Points of Significance: Designing Comparative Experiments Nature Methods 11:597-598.

...more about the Points of Significance column

Monkeys on a Hilbert Curve—Scientific American Graphic

Tue 19-08-2014

I was commissioned by Scientific American to create an information graphic that showed how our genomes are more similar to those of the chimp and bonobo than to the gorilla.

I had about 5 x 5 inches of print space to work with. For 4 genomes? No problem. Bring out the Hilbert curve!

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Our genomes are much more similar to the chimp and bonobo than to the gorilla. And, we're practically still Denisovans. (details)

To accompany the piece, I will be posting to the Scientific American blog about the process of creating the figure. And to emphasize that the genome is not a blueprint!

As part of this project, I created some Hilbert curve art pieces. And while exploring, found thousands of Hilbertonians!

Happy Pi Approximation Day— π, roughly speaking 10,000 times

Wed 13-08-2014

Celebrate Pi Approximation Day (July 22nd) with the art of arm waving. This year I take the first 10,000 most accurate approximations (m/n, m=1..10,000) and look at their accuracy.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Accuracy of the first 10,000 m/n approximations of Pi. (details)

I turned to the spiral again after applying it to stack stacked ring plots of frequency distributions in Pi for the 2014 Pi Day.

Martin Krzywinski @MKrzywinski mkweb.bcgsc.ca
Frequency distribution of digits of Pi in groups of 4 up to digit 4,988. (details)