Inked Sadness is a collection of poems written in that difficult time between being no longer young, but not yet old.
Expressions and Conversations of Love are short heart-breakers.
Proverbial Man considers how our names and expectations limit our perceptions and freedoms. No answers are offered. I don't think I finished this.
The Surrogate echoes my own fears of fleeing from Poland in the early 80s. Or at least the fears I retroactively erected, to add drama. Count on the Polish for drama.
Thirty Reasons should be enough to decide a place isn't worth returning to.
Apply visual grouping principles to add clarity to information flow in pathway diagrams.
We draw on the Gestalt principles of connection, grouping and enclosure to construct practical guidelines for drawing pathways with a clear layout that maintains hierarchy.
We include tips about how to use negative space and align nodes to emphasizxe groups and how to effectively draw curved arrows to clearly show paths.
Hunnicutt, B.J. & Krzywinski, M. (2016) Points of Viev: Pathways. Nature Methods 13:5.
Wong, B. (2010) Points of Viev: Gestalt principles (part 1). Nature Methods 7:863.
Wong, B. (2010) Points of Viev: Gestalt principles (part 2). Nature Methods 7:941.
When multiple variables are associated with a response, the interpretation of a prediction equation is seldom simple.
This month we continue with the topic of regression and expand the discussion of simple linear regression to include more than one variable. As it turns out, although the analysis and presentation of results builds naturally on the case with a single variable, the interpretation of the results is confounded by the presence of correlation between the variables.
By extending the example of the relationship of weight and height—we now include jump height as a second variable that influences weight—we show that the regression coefficient estimates can be very inaccurate and even have the wrong sign when the predictors are correlated and only one is considered in the model.
Care must be taken! Accurate prediction of the response is not an indication that regression slopes reflect the true relationship between the predictors and the response.
Altman, N. & Krzywinski, M. (2015) Points of Significance: Multiple Linear Regression Nature Methods 12:1103-1104.
Altman, N. & Krzywinski, M. (2015) Points of significance: Simple Linear Regression Nature Methods 12:999-1000.
Students generated images published in Fast Diploidization in Close Mesopolyploid Relatives of Arabidopsis.
Students also learned how to use hive plots to show synteny.
Mandakova, T. et al. Fast Diploidization in Close Mesopolyploid Relatives of Arabidopsis The Plant Cell, Vol. 22: 2277-2290, July 2010
Choose your own dust adventure!
Nobody likes dusting but everyone should find dust interesting.
Working with Jeannie Hunnicutt and with Jen Christiansen's art direction, I created this month's Scientific American Graphic Science visualization based on a recent paper The Ecology of microscopic life in household dust.
We have also written about the making of the graphic, for those interested in how these things come together.
Barberan A et al. (2015) The ecology of microscopic life in household dust. Proc. R. Soc. B 282: 20151139.